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feat(refit): complete S1-S6 — case abstraction, grounding, log-odds, plugins, coref, multi-source

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Consolidates the long-running refit work (DESIGN.md as authoritative spec)
into a single baseline commit. Six stages landed together:

  S1  Case + EvidenceSource abstraction; tools parameterised by source_id
      (case.py, main.py multi-source bootstrap, .bin extension support)
  S2  Grounding gateway in add_phenomenon: verified_facts cite real
      ToolInvocation ids; substring / normalised match enforced; agent +
      task scope checked. Phenomenon.description split into verified_facts
      (grounded) + interpretation (free text). [invocation: inv-xxx]
      prefix on every wrapped tool result so the LLM can cite.
  S3  Confidence as additive log-odds: edge_type → log10(LR) calibration
      table; commutative updates; supported / refuted thresholds derived
      from log_odds; hypothesis × evidence matrix view.
  S4  iOS plugin: unzip_archive + parse_plist / sqlite_tables /
      sqlite_query / parse_ios_keychain / read_idevice_info;
      IOSArtifactAgent; SOURCE_TYPE_AGENTS routing.
  S5  Cross-source entity resolution: typed identifiers on Entity,
      observe_identity gateway, auto coref hypothesis with shared /
      conflicting strong/weak LR edges, reversible same_as edges,
      actor_clusters() view.
  S6  Android partition probe + AndroidArtifactAgent; MediaAgent with
      OCR fallback; orchestrator Phase 1 iterates every analysable
      source; platform-aware get_triage_agent_type; ReportAgent renders
      actor clusters + per-source breakdown.

142 unit tests / 1 skipped — full coverage of the new gateway, log-odds
math, coref hypothesis fall-out, and orchestrator multi-source dispatch.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
This commit is contained in:
BattleTag
2026-05-21 02:12:10 -10:00
parent 444d58726a
commit 81ade8f7ac
24 changed files with 5137 additions and 244 deletions
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